plotCurves.ResScanOutputMultiFunct {HDSpatialScan}

Plots the curves in the clusters detected by the multivariate functional scan functions (MPFSS, NPFSS, MDFFSS or MRBFSS)

Description

This function plot the curves in the clusters detected by the multivariate functional scan functions (MPFSS, NPFSS, MDFFSS or MRBFSS).

Usage

## S3 method for class 'ResScanOutputMultiFunct'
plotCurves(
  x,
  add_mean = FALSE,
  add_median = FALSE,
  colors = "red",
  only.MLC = FALSE,
  ...
)

Arguments

x

ResScanOutputMultiFunct. Output of a multivariate functional scan function (MPFSS, NPFSS, MDFFSS or MRBFSS).

add_mean

boolean. If TRUE it adds the global mean curve in black.

add_median

boolean. If TRUE it adds the global median curve in blue.

colors

character. The colors to plot the clusters' curves. If length(colors)==1 then all the clusters will be plotted in this color. Else there must be the same number of elements in colors than the number of clusters

only.MLC

logical. Should we plot only the MLC or all the significant clusters?

...

Further arguments to be passed to or from methods.

Value

No value returned, plots the curves.

Examples

library(sp)
data("map_sites")
data("fmulti_data")
coords <- coordinates(map_sites)

res_npfss <- SpatialScan(method = "NPFSS", data = fmulti_data, sites_coord = coords,
system = "WGS84", mini = 1, maxi = nrow(coords)/2)$NPFSS

plotCurves(x = res_npfss, add_mean = TRUE, add_median = TRUE)