Inspector-class {GWASinspector}

An S4 class to represent the methods and parameters for inspecting a list of GWAS study result files.

Description

An object of this class is created by setup_inspector function. Each section of the configuration file is represented as a list of attributes in this object.

Slots

paths

A list of parameters which indicate Paths section from configuration file.

supplementaryFiles

A list of parameters which indicate supplementaryFiles section from configuration file.

input_parameters

A list of parameters which indicate input_parameters section from configuration file.

output_parameters

A list of parameters which indicate output_parameters section from configuration file.

remove_chromosomes

A list of parameters which indicate remove_chromosomes section from configuration file.

plot_specs

A list of parameters which indicate plot_specs section from configuration file.

filters

A list of parameters which indicate filters section from configuration file.

debug

A list of parameters which indicate debug section from configuration file.

input_files

A list of files that will be inspected during the run.

created_at

The time that object was created.

start_time

The time that object was run.

end_time

The time that run was finished.

StudyList

An object of StudyList class.