U.center {GSDA} | R Documentation |
U Centering
Description
U-center the distance matrix in preparation of computing distance correlations.
Usage
U.center(d)
Arguments
d |
A square numeric data matrix |
Details
This funtion centers the distance matrix according to U-centering formula on page 6 of arXiv 1902.03291 paper
Value
A centered data matrix
Author(s)
Xueyuan Cao xcao12@uthsc.edu and Stanley Pounds stanley.pounds@stjude.org
References
Cao X and Pounds S (2021) Gene-Set Distance Associations (GSDA): A Powerful Tool for Gene-Set Association Analysis.
Zhu C, Yao S, Zhang X and Shao X. Distance-based and RKHS-based Dependence Metrics in High Dimension. arXiv:1902.03291
See Also
Examples
data(target.aml.clin)
cd=cat.dist(target.aml.clin$Chloroma)
ud=U.center(cd)
ud[1:5,1:5]
[Package GSDA version 1.0 Index]