Gene Set Distance Analysis (GSDA)
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Documentation for package ‘GSDA’ version 1.0
Help Pages
| GSDA-package | Gene Set Distance Analysis (GSDA) |
| best.dist.corr | Best Distance Correlattion |
| cat.dist | Distance for a Categorical Variable |
| dist.corr | Distance Correlattion |
| GSDA | Gene Set Distance Analysis (GSDA) |
| gsda | Gene-Set Distance Analsysis (GSDA) |
| kegg.ml.gsets | KEGG gene set data for the AML and CML pathways |
| prep.gsda | GSDA Data Preparation |
| prep.msigdb | Preparation of MSigDB for GSDA |
| print.bdc | Print Method for Best Distance Correlation |
| print.dcor | Print Method for Distance Correlation |
| print.gsda.result | Print Method for GSDA Result |
| surv.dist | Distance of a Survival Endpoint |
| target.aml.clin | Clinical outcomes for AML TARGET Project |
| target.aml.expr | RNA-seq expression from the AML TARGET project |
| U.center | U Centering |
| uc.dist | U-centered Distance Matrix |
| write.gsda.csv.file | Write GSDA Result to a Comma Delimited File |