Level2NoLeafNodeBP {GOxploreR} | R Documentation |
Non-leaf GO-terms on a GO BP level
Description
This function returns all the non-leaf GO-terms on a particular GO BP level. The supported organism are "Homo sapiens / Human", "Rattus norvegicus / Rat", "Mus musculus / Mouse", "Danio rerio / Zebrafish", "Caenorhabditis elegans / Worm", "Arabidopsis thaliana / Cress", "Saccharomyces cerevisiae / Yeast", "Schizosaccharomyces pombe / Fission yeast", "Drosophila melanogaster / Fruit fly", "Escherichia coli / E.coli"
Usage
Level2NoLeafNodeBP(level, organism = NULL)
Arguments
level |
A numeric value for the GO-level |
organism |
The organism of interest from the list of supported organism. If NULL the results are from the general GO-DAG (default) |
Value
A set of non-leaf GO-terms
Examples
# Non-leaf nodes from level 13 GO-DAG
Level2NoLeafNodeBP(13)
# Non-leaf nodes from level 3 for Rat BP GO-DAG
Level2NoLeafNodeBP(3, "Rattus norvegicus")
[Package GOxploreR version 1.2.7 Index]