comparison_ex_compress_CH {GOCompare}

Functional enrichment analysis comparison between H. sapiens and A. thaliana for "DCE", and "RCD" cancer-hallmarks. This dataset contains 10 GO terms per category to allow a fast run of the function graph_two_GOspecies.

Description

This dataset is the results of running the compareGOspecies species and it is composed of three slots:

distance

numeric: Jaccard distance matrix

shared_GO_list

data.frame with shared GO terms between species

unique_GO_list

data.frame with unique GO terms and their belonging two each species

Usage

comparison_ex_compress_CH

Format

An object of class list of length 3.

Source

https://data.mendeley.com/datasets/myyy2wxd59/1

References

Clavijo-Buriticá, Sosa, C.C., Mosquera, A.J. Álvarez, A., Medina, J. Quimbaya, M.A. A systematic comparison of the molecular machinery associated with Cancer-Hallmarks between plants and humans reveals Arabidopsis thaliana as a useful model to understand specific carcinogenic events (to be submitted, Target journal: Plos Biology)