| H_sapiens_compress {GOCompare} | R Documentation |
H. sapiens functional enrichment analysis results for "AID","DCE","RCD","SPS" cancer-hallmarks
Description
This dataset is a subset of the original dataset obtained for Clavijo-Buriticá (In preparation)
Usage
H_sapiens_compress
Format
A data frame with 120 rows and 6 variables (30 GO terms per cancer hallmark):
- Enrichment_FDR
Numeric: False discovery rate values for the GO term
- Genes_in_list
numeric: Number of genes in the list of genes for a given GO term
- Total_genes
numeric: Number of genes in the genome of a species for a given GO term
- Functional_Category
character: GO term name or GO term id
- Genes
character: Genes found fot a given GO term
- feature
character: A column representing the belonging of a group of comparison
Source
https://data.mendeley.com/datasets/myyy2wxd59/1
References
Clavijo-Buriticá, Sosa, C.C., Mosquera, A.J. Álvarez, A., Medina, J. Quimbaya, M.A. A systematic comparison of the molecular machinery associated with Cancer-Hallmarks between plants and humans reveals Arabidopsis thaliana as a useful model to understand specific carcinogenic events (to be submitted, Target journal: Plos Biology)