centered_AUC {GCalcium}

Compute centered area under curve

Description

'centered_AUC' computes the area under the curve (AUC) after centering values using a specified function, such as mean or min. Computed using trapezoidal integration.

Usage

centered_AUC(Dataframe, Trial, FUN = mean)

Arguments

Dataframe

a GCalcium-format data frame or matrix

Trial

a single trial number

FUN

a function to apply to each window

Value

Data frame of AUCs and curve number for each curve

Examples

# Get AUCs for trial 2, centered at the mean
df.new <- format_data(data = GCaMP)
centered_AUC(Dataframe = df.new, Trial = 2, FUN = mean)