print.summary.penmodel {FamEvent}

Print method for summary.penmodel of a fitted penetrance model.

Description

Prints a short summary of parameter and penetrance estimates of a 'summary.penmodel' object.

Usage

## S3 method for class 'summary.penmodel'
print(x, digits = max(3, getOption("digits") - 3),
  signif.stars=TRUE, ...)

Arguments

x

An object class of 'summary.penmodel', a result of a call to summary.penmodel.

digits

Number of significant digits to use when printing.

signif.stars

Logical; if TRUE, provides stars to hightlight significant p-values. Default is TRUE.

...

Further arguments passed to or from other methods.

Value

Prints a summary of parameter estimates, their standard errors, t-statistics and corresponding two-sided p-values and additionally indicates significance stars if signif.stars is TRUE.

Also prints penetrance estimates by age 70 specific to gender and mutation-status subgroups along with their standard errors and 95% confidence intervals.

Returns an object of class 'summary.penmodel'.

Author(s)

Yun-Hee Choi

See Also

penmodel, penmodelEM, print.penmodel, summary.penmodel