| example_drug_target_list {DTSEA} | R Documentation |
An example data frame of drug target lists
Description
Drug-target interactions were downloaded and integrated from DrugBank and ChEMBL.
Usage
example_drug_target_list
Format
A data frame with 970 rows and 3 variables:
-
drug_id: the DrugBank ID -
drug_name: the name of each drug -
gene_target: the targets of drugs
References
Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335.
Gaulton A, Hersey A, Nowotka M, Bento AP, Chambers J, Mendez D, Mutowo P, Atkinson F, Bellis LJ, Cibrián-Uhalte E, Davies M, Dedman N, Karlsson A, Magariños MP, Overington JP, Papadatos G, Smit I, Leach AR. The ChEMBL database in 2017. Nucleic Acids Res. 2017 Jan 4;45(D1):D945-D954. doi: 10.1093/nar/gkw1074. Epub 2016 Nov 28. PMID: 27899562; PMCID: PMC5210557.
Examples
library(DTSEA)
data("example_drug_target_list", package = "DTSEA")