read10XVisium {DR.SC}

Read the spatial transcriptomics data measured on 10X Visium platform

Description

Read the spatial transcriptomics data measured on 10X Visium platform as a Seurat object, where the spatial coordinates are saved in the metadata, named "row" and "col".

Usage

  read10XVisium(dirname)

Arguments

dirname

A string, the dictory of Visium datasets

Details

Nothing

Value

return a Seurat object.

Note

nothing

Author(s)

Wei Liu

References

None

See Also

None

Examples

## Not run: 
  ## set your file directory, then read it.
  data_name <- "D/HCC"
  HCC1 <- read10XVisium(data_name)
  
## End(Not run)