Model-Based Detection of Disease Clusters

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Documentation for package ‘DClusterm’ version 1.0-1

• DESCRIPTION file.
• User guides, package vignettes and other documentation.

Help Pages

brainnav	Brain cancer in males in Navarre, Spain, 1988-1994.
brainnavnb	Brain cancer in males in Navarre, Spain, 1988-1994.
brainNM	Brain cancer in New Mexico, USA, 1973-1991.
brainNM_clusters	Brain cancer in New Mexico, USA, 1973-1991.
brainst	Brain cancer in New Mexico, USA, 1973-1991.
CalcStatClusterGivenCenter	Calls the function to obtain the cluster with the maximum log-likelihood ratio or minimum DIC of all the clusters with the same center and start and end dates.
CalcStatsAllClusters	Obtains the clusters with the maximum log-likelihood ratio or minimum DIC for each center and start and end dates.
computeprob	Computes the probability that a model parameter is <=k from inla marginals
CreateGridDClusterm	Creates grid over the study area.
DetectClustersModel	Detects clusters and computes their significance.
get.allknclusters	Extract indices of the areas in the clusters detected
get.stclusters	Gets areas in a spatio-temporal cluster
glmAndZIP.iscluster	Obtains the cluster with the maximum log-likelihood ratio or minimum DIC of all the clusters with the same center and start and end dates.
knbinary	Constructs data frame with clusters in binary format.
losalamos	Brain cancer in New Mexico, USA, 1973-1991.
mergeknclusters	Merges clusters so that they are identifed as levels of a factor.
Navarre	Brain cancer in males in Navarre, Spain, 1988-1994.
nm.cl0	Brain cancer in New Mexico, USA, 1973-1991.
nm.cl1	Brain cancer in New Mexico, USA, 1973-1991.
nm.m0	Brain cancer in New Mexico, USA, 1973-1991.
nm.m1	Brain cancer in New Mexico, USA, 1973-1991.
ny.cl0	Leukemia in an eight-county region of upstate New York, 1978-1982.
ny.cl1	Leukemia in an eight-county region of upstate New York, 1978-1982.
ny.m0	Leukemia in an eight-county region of upstate New York, 1978-1982.
ny.m1	Leukemia in an eight-county region of upstate New York, 1978-1982.
NY8	Leukemia in an eight-county region of upstate New York, 1978-1982.
NY8_clusters	Leukemia in an eight-county region of upstate New York, 1978-1982.
SelectStatsAllClustersNoOverlap	Removes the overlapping clusters.
SetVbleCluster	Constructs a variable that indicates the locations and times that pertain to a cluster.
slimknclusters	Remove overlapping clusters
TCE	Leukemia in an eight-county region of upstate New York, 1978-1982.