clInitializeTernaryQuarts {CongreveLamsdell2016}

Initialize ternary plots for quartet plotting

Description

Sets up a blank ternary plot ready for analytical results to be added.

Usage

clInitializeTernaryQuarts(
  zoom = 1,
  padding = 0.1,
  gridLines = 10,
  fontSize = 1,
  gridCol = "#DBDBDB",
  backgroundCol = "#FDFDFE",
  xLim = c(0, 1/zoom) - 0.01,
  yLim = c(0.5 - (1/zoom), 0.5),
  isometric = TRUE
)

clInitializeTernarySplits(
  fontSize = 1,
  xLim = NULL,
  yLim = NULL,
  gridCol = "#DBDBDB",
  backgroundCol = "#FDFDFE",
  padding = 0.1,
  isometric = TRUE
)

Arguments

zoom

Level of magnification (times), used to adjust ticks and scale.

padding

Padding, passed to TernaryPlot.

gridLines

Number of grid lines, passed to TernaryPlot as grid.lines.

fontSize

Font size, passed to TernaryPlot as lab.cex.

gridCol

Colour, passed to TernaryPlot as grid.col.

backgroundCol

Background colour, passed to TernaryPlot as col.

xLim, yLim

x and y limits, passed to TernaryPlot as xlim, ylim.

isometric

Logical specifying whether plot should be isometric, passed to TernaryPlot as isometric.

Functions

• clInitializeTernarySplits(): Initialize ternary plots for partition plotting.