Check_Dupe_Columns | checks for duplicated column names |

Check_Trunc | Applies time duration truncation limits |

Correct_Formula_Order | Corrects the order of terms/formula/etc |

Cox_Relative_Risk | Calculates hazard ratios for a reference vector |

Date_Shift | Automates creating a date difference column |

Def_Control | Automatically assigns missing control values |

Def_Control_Guess | Automatically assigns missing guessing control values |

Def_modelform_fix | Automatically assigns geometric-mixture values |

Def_model_control | Automatically assigns missing model control values |

factorize | Splits a parameter into factors |

factorize_par | Splits a parameter into factors in parallel |

Gather_Guesses_CPP | Performs checks to gather a list of guesses and iterations |

gcc_version | Checks default c++ compiler |

gen_time_dep | Applies time dependence to parameters |

GetCensWeight | Calculates and returns data for time by hazard and survival to estimate censoring rate |

get_os | Checks system OS |

interact_them | Defines Interactions |

Joint_Multiple_Events | Automates creating data for a joint competing risks analysis |

Likelihood_Ratio_Test | Defines the likelihood ratio test |

Linked_Dose_Formula | Calculates Full Parameter list for Special Dose Formula |

Linked_Lin_Exp_Para | Calculates The Additional Parameter For a linear-exponential formula with known maximum |

OMP_Check | Checks the OMP flag |

Rcomp_version | Checks how R was compiled |

Rcpp_version | Checks default R c++ compiler |

Replace_Missing | Automatically assigns missing values in listed columns |

RunCoxEventAssignment | Approximates how many events were due to baseline vs excess risk |

RunCoxNull | Performs basic Cox Proportional Hazards regression with the null model |

RunCoxPlots | Performs Cox Proportional Hazard model plots |

RunCoxRegression | Performs basic Cox Proportional Hazards regression without special options |

RunCoxRegression_Basic | Performs basic Cox Proportional Hazards regression with a multiplicative log-linear model |

RunCoxRegression_CR | Performs basic Cox Proportional Hazards regression with competing risks |

RunCoxRegression_Guesses_CPP | Performs basic Cox Proportional Hazards regression, Allows for multiple starting guesses on c++ side |

RunCoxRegression_Omnibus | Performs Cox Proportional Hazards regression using the omnibus function |

RunCoxRegression_Single | Performs basic Cox Proportional Hazards calculation with no derivative |

RunCoxRegression_STRATA | Performs basic Cox Proportional Hazards regression with strata effect |

RunCoxRegression_Tier_Guesses | Performs basic cox regression, with multiple guesses, starts with solving for a single term |

RunPoissonEventAssignment | Predicts how many events are due to baseline vs excess |

RunPoissonRegression | Performs basic poisson regression |

RunPoissonRegression_Guesses_CPP | Performs basic Poisson regression, Allows for multiple starting guesses on c++ side |

RunPoissonRegression_Joint_Omnibus | Performs basic Poisson regression using the omnibus function |

RunPoissonRegression_Omnibus | Performs basic Poisson regression using the omnibus function |

RunPoissonRegression_Single | Performs poisson regression with no derivative calculations |

RunPoissonRegression_STRATA | Performs poisson regression with strata effect |

RunPoissonRegression_Tier_Guesses | Performs basic poisson regression, with multiple guesses, starts with a single term |

System_Version | Checks OS, compilers, and OMP |

Time_Since | Automates creating a date since a reference column |