Motif_from_cluster_file {ClusTCR2}

Code for plotting the Motif based on a specific CDR3 length and V gene (see netplot_ClusTCR2 for details).

Description

Code for plotting the Motif based on a specific CDR3 length and V gene (see netplot_ClusTCR2 for details).

Usage

Motif_from_cluster_file(
  ClusTCR,
  Clust_selected = NULL,
  selected_cluster_column = "Clust_size_order"
)

Arguments

ClusTCR

Cluster file produced from mcl_cluster.

Clust_selected

Select which cluster to review.

selected_cluster_column

Select the column "Clust_size_order" of the cluster ordered.

Value

A ggplot object representing the motif.