temporalSimu {ClueR}

Temporal data simulation

Description

This function simulates time-series data using 14 pre-defined temporal profile templates. Type 'temporalSimu' to see the details of the templates.

Usage

temporalSimu(seed = unclass(Sys.time()), groupSize, sdd, numGroups)

Arguments

seed

to seed the simulation. Default is current system time.

groupSize

the number of the temporal profiles to simulate from each template. The total number of profiles will be the number of templates used times the size of each group.

sdd

the standard deviation to be used to generate randomness for each temporal profile.

numGroups

number of templates to be used for generating data.

Value

a matrix containing simulated time-series dataset.

Examples

# simulate a time-series data with four distinctive profile groups and each group with 
# a size of 500 phosphorylation sites

simulated.temporal <- temporalSimu(seed=1, groupSize=500, sdd=1, numGroups=4)