Cluster Evaluation


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Documentation for package ‘ClueR’ version 1.4

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ClueR-package CLUster Evaluation R package
adipocyte Mouse adipocyte differentiation gene expression (microarray) data
CLUE CLUster Evaluation R package
ClueR CLUster Evaluation R package
clustEnrichment Cluster enrichment test
clustOptimal Generate optimal clustering
enrichmentTest Fisher's exact test-based enrichment test
fuzzPlot Visualize fuzzy clustering results
hES Human embryonic stem cell phosphoproteomics data
Pathways.biocarta Biocarta pathway annotations
Pathways.DAVID DAVID pathway annotations
Pathways.KEGG KEGG pathway annotations
Pathways.reactome Reactome pathway annotations
PhosphoELM.human Phospho.ELM annotations for human
PhosphoELM.mouse Phospho.ELM annotations for mouse
PhosphoSite.human PhosphoSitePlus annotations for human
PhosphoSite.mouse PhosphoSitePlus annotations for mouse
runClue Run CLUster Evaluation
temporalSimu Temporal data simulation