Pre-Process DNA Copy Number (CN) Data for Detection of CN Events
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Documentation for package ‘CNprep’ version 2.2
Help Pages
| annotexample | Annotation table for ROMA CGH platform and human genome version 17. |
| applyCNPmask | Apply a mask to a table of copy number events. |
| cnpexample | Example of a boundary positions table. |
| CNpreprocessing | Pre-process DNA copy number (CN) data for detection of CN events. |
| makeCNPmask | Given a set of copy-number events, create a DNA copy-number mask |
| normsegs | A reference set of segments |
| ratexample | Example of copy number log ratio data |
| segexample | Example of a segmented copy number table. |