cdm_from_files {CDMConnector}

Create a CDM reference from a folder containing parquet, csv, or feather files

Description

Create a CDM reference from a folder containing parquet, csv, or feather files

Usage

cdm_from_files(
  path,
  format = "auto",
  cdm_version = "5.3",
  cdm_name = NULL,
  as_data_frame = TRUE
)

cdmFromFiles(
  path,
  format = "auto",
  cdmVersion = "5.3",
  cdmName = NULL,
  asDataFrame = TRUE
)

Arguments

path

A folder where an OMOP CDM v5.4 instance is located.

format

What is the file format to be read in? Must be "auto" (default), "parquet", "csv", "feather".

cdm_version, cdmVersion

The version of the cdm (5.3 or 5.4)

cdm_name, cdmName

A name to use for the cdm.

as_data_frame, asDataFrame

TRUE (default) will read files into R as dataframes. FALSE will read files into R as Arrow Datasets.

Value

A list of dplyr database table references pointing to CDM tables