Age-Specific Survival Analysis from Incomplete Capture-Recapture/Recovery Data


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Documentation for package ‘BaSTA’ version 1.9.4

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BaSTA-package BaSTA: a package for parametric Bayesian estimation of age-specific survival for truncated and censored capture-recapture/recovery records.
BaSTA BaSTA: a package for parametric Bayesian estimation of age-specific survival for truncated and censored capture-recapture/recovery records.
basta Parametric Bayesian estimation of age-specific survival for left-truncated and right-censored capture-recapture/recovery data.
basta.default Parametric Bayesian estimation of age-specific survival for left-truncated and right-censored capture-recapture/recovery data.
CensusToCaptHist Constructs capture-history matrix from census matrix to be used in Bayesian Survival Trajectory Analysis (BaSTA).
DataCheck A function to check the input data file for a Bayesian Survival Trajectory Analysis (BaSTA) analysis.
MakeCovMat Function to build a matrix of covariates (i.e. design matrix) for a Bayesian Survival Trajectory Analysis (BaSTA) analysis.
MakeLifeTable A function for calculating standard cohort-based life tables from age at death data.
multibasta Function to run multiple BaSTA models on the same dataset.
plot.basta Summarizing and plotting Bayesian Survival Trajectory Analysis (BaSTA) model outputs.
print.basta Summarizing and plotting Bayesian Survival Trajectory Analysis (BaSTA) model outputs.
print.multibasta Function to run multiple BaSTA models on the same dataset.
sim1 Simulated dataset to demonstrate Bayesian Survival Trajectory Analysis (BaSTA)
sim1Out Output from a Bayesian Survival Trajectory Analysis (BaSTA) analysis on a simulated dataset
summary.basta Summarizing and plotting Bayesian Survival Trajectory Analysis (BaSTA) model outputs.
summary.multibasta Function to run multiple BaSTA models on the same dataset.