Bayesian Time-Stratified Population Analysis


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Documentation for package ‘BTSPAS’ version 2021.1.1

Help Pages

expit Logit and anti-logit function.
logit Logit and anti-logit function.
RunTime Compute percentiles of the run timing distribution.
SimplePetersen Simple Petersen Estimator and test if pooling can be done
TestIfPool Simple Petersen Estimator and test if pooling can be done
TimeStratPetersenDiagErrorWHChinook2_fit Wrapper (*_fit) to fit the Time Stratified Petersen Estimator with Diagonal Entries and separating Wild from Hatchery Chinook function.
TimeStratPetersenDiagErrorWHChinook_fit Wrapper (*_fit) to fit the Time Stratified Petersen Estimator with Diagonal Entries and separating Wild from Hatchery Chinook function.
TimeStratPetersenDiagErrorWHSteel_fit Wrapper (*_fit) and function to call the Time Stratified Petersen Estimator with Diagonal Entries and separating Wild from Hatchery Steelhead function.
TimeStratPetersenDiagError_fit Wrapper (*_fit) to call the Time Stratified Petersen Estimator with Diagonal Entries function.
TimeStratPetersenNonDiagErrorNPMarkAvail_fit Wrapper (*_fit) to call the function to fit a Time Stratified Petersen Estimator with NON Diagonal Entries with an non-parametric travel time and fall back
TimeStratPetersenNonDiagErrorNP_fit Wrapper (*_fit) to fit the Time Stratified Petersen Estimator with NON Diagonal Entries function and a non-parametric travel time estimator..
TimeStratPetersenNonDiagError_fit Wrapper (*_fit) to fit the Time Stratified Petersen Estimator with NON Diagonal Entries function.
TimeToTargetRunSize Computes and plots posterior distribution of time to get target run size. For example, the time to reach a cumulative run of 10,000 fish.