Safety Assessment in Agricultural Field Trials

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Documentation for package ‘BSagri’ version 0.1-10

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allignment Allignment according to one factor
BOOTSimpsonD Simultaneous confidence intervals for Simpson indices
BOOTSimpsonR Simultaneous confidence intervals for Simpson indices
Brachycera Eklektor counts of Brachycera
c2compnames Define row names of a contrast matrix, depending on its column names
Cica1 Catches of Planthoppers and Leafhoppers
Cica2 Catches of Planthoppers and Leafhoppers
CIGLM Wrapper to compute confidence intervals from glms
CInp Construct local confidence intervals from joint empirical distribution.
CInp.bugs Construct local confidence intervals from joint empirical distribution.
CInp.CCDiff Construct local confidence intervals from joint empirical distribution.
CInp.CCRatio Construct local confidence intervals from joint empirical distribution.
CInp.default Construct local confidence intervals from joint empirical distribution.
CountRep Simulated count data incl. repeated measurements
Decomp A simulated data set
Diptera Soil eklektor data for some families of Diptera
ExNBCov Simulated example data, drawn from a Negative Binomial Distribution
ExPCov Simulated example data following a Poisson distribution
fakeln A simulated data set of lognormal data
Feeding Pupation and Hatching rate in a feeding experiment with four varieties
IAcontrasts Interaction contrasts for 2-factorial designs
IAcontrastsCMAT Interaction contrasts for a two-factorial design
Lepi Insect counts of 12 Species
MM1 Simulated data set for a simple mixed model
MMPois Simulated data for a simple mixed model with Poisson response
MMPoisRep Simulated data for a simple mixed model with Poisson response
Nematocera Trap counts of Nematocera
plotCI.simplesimint Plot confidence intervals calculated by pairwiseCI
plotCI.UnlogCI Plot confidence intervals calculated by pairwiseCI
SCSnp Simultaneous confidence sets from empirical joint distribution.
SCSnp.bugs Simultaneous confidence sets from empirical joint distribution.
SCSnp.CCDiff Simultaneous confidence sets from empirical joint distribution.
SCSnp.CCRatio Simultaneous confidence sets from empirical joint distribution.
SCSnp.default Simultaneous confidence sets from empirical joint distribution.
simplesimint Simultaneous confidence intervals from raw estimates
summary.simplesimint Detailed print out for simplesimint objects
UnlogCI Transform confidence intervals from glm fits.
UnlogCI.glht Transform confidence intervals from glm fits.
vcov.gamlss Extract variance covariance matrix from objects of class gamlss
vcov.geeglm Extract variance covariance matrix from objects of class geeglm