buildMCMC {BRugs} | R Documentation |
Generating mcmc.list objects for package coda
Description
This functions reads samples from OpenBUGS and converts the results into an object of class mcmc.list that can directly be used by package coda for further analysis.
Usage
buildMCMC(node, beg = samplesGetBeg(), end = samplesGetEnd(),
firstChain = samplesGetFirstChain(),
lastChain = samplesGetLastChain(), thin = samplesGetThin())
Arguments
node |
Character vector of length 1, name of a variable in the model. |
beg , end |
Arguments to select a slice of monitored values corresponding to iterations |
firstChain , lastChain |
Arguments to select a sub group of chains. |
thin |
To only use every |
Details
If the variable of interest is an array, slices of the array can be selected using the notation
variable[lower0:upper0, lower1:upper1, ...]
.
A star ‘*
’ can be entered as shorthand for all the stored samples.
If the arguments are left at their defaults the whole sample for all chains will be used for calculation.
Value
An object of class mcmc.list
which is a list containing mcmc
objects.
See Also
mcmc.list
, mcmc
, BRugs
, help.WinBUGS