site.f {AmpliconDuo} | R Documentation |
Sampling Site Short Names
Description
Character vector with the names of the sampling sites, corresponding to
the names used to denote amplicon frequencies in
the ampliconfreqs
data.
Usage
data(site.f)
Format
The format is: chr [1:8] "FU25" "FU28" "FU31.1" "FU31.2" "FU34" "FU37" "UniPond" "BogSoil"
References
Boenigk J, Heider D, Jost S, Lange A, Budeus B, Schilling E, Strittmatter A, Hoffmann D: A high-throughput amplicon sequencing and analysis protocol for comparative analyses of microbial communities (submitted)
Examples
data(site.f)
data(ampliconfreqs)
ampliconduo(ampliconfreqs[,1:6], sample.names = site.f[1:3])
[Package AmpliconDuo version 1.1.1 Index]