site.f {AmpliconDuo}

Sampling Site Short Names

Description

Character vector with the names of the sampling sites, corresponding to the names used to denote amplicon frequencies in the ampliconfreqs data.

Usage

data(site.f)

Format

The format is: chr [1:8] "FU25" "FU28" "FU31.1" "FU31.2" "FU34" "FU37" "UniPond" "BogSoil"

References

Boenigk J, Heider D, Jost S, Lange A, Budeus B, Schilling E, Strittmatter A, Hoffmann D: A high-throughput amplicon sequencing and analysis protocol for comparative analyses of microbial communities (submitted)

Examples

data(site.f)
data(ampliconfreqs)
ampliconduo(ampliconfreqs[,1:6], sample.names = site.f[1:3])