predictions,Classifier-method {Allspice} | R Documentation |
Category predictions
Description
Classifies samples based on their profiles.
Usage
predictions(obj)
Arguments
obj |
An object of the class Classifier. |
Details
Use the functions covariates()
and
profiles()
to import data into the classifier.
Value
Returns a list of data frames that contain the output from each
classification asset within the classifier. See classify()
for details on the result items.
Examples
# Simulated data.
simu <- bcellALL(5)
# Predict subtypes.
cls <- classifier(verbose = FALSE)
covariates(cls) <- simu$metadata
profiles(cls) <- simu$counts
pred <- predictions(cls)
print(pred[[1]][,c("LABEL","PROX","EXCL")])
print(pred[[2]][,c("LABEL","PROX","EXCL")])
print(pred[[3]][,c("LABEL","PROX","EXCL")])
[Package Allspice version 1.0.7 Index]