RNA-Seq Profile Classifier

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Documentation for package ‘Allspice’ version 1.0.7

• DESCRIPTION file.
• User guides, package vignettes and other documentation.

Help Pages

assemble	Finish Asset contents
assemble-method	Finish Asset contents
assemble<-	Finish Asset contents
assemble<--method	Finish Asset contents
asset	Constructor for Asset
Asset-class	Constructor for Asset
bcellALL	Simulated data
classifier	Constructor for Classifier
Classifier-class	Constructor for Classifier
classify	Data classification
classify-method	Data classification
configuration	Asset configuration
configuration-method	Asset configuration
configuration<-	Asset configuration
configuration<--method	Asset configuration
covariates	Sample covariate data
covariates-method	Sample covariate data
covariates<-	Sample covariate data
covariates<--method	Sample covariate data
export	Data classification
export-method	Data classification
information	Classifier contents
information-method	Classifier contents
nomenclature	Variable names
nomenclature-method	Variable names
nomenclature<-	Variable names
nomenclature<--method	Variable names
normalize	Sample normalization
normalize-method	Sample normalization
predictions	Category predictions
predictions-method	Category predictions
profiles	Sample data profiles
profiles<-	Sample data profiles
profiles<--method	Sample data profiles
report	Visualization of results
report-method	Visualization of results
scores	Category scores
scores-method	Category scores
standardize	Data standardization
standardize-method	Data standardization
visuals	Visual attributes
visuals-method	Visual attributes
visuals<-	Visual attributes
visuals<--method	Visual attributes