R: Check problems in output of 'clean

check_problems {ARUtools}

R Documentation

Check problems in output of `clean_metadata()`

Description

Cleaning metadata can take a series of tries. This function helps summarize and explore missing metadata (problems).

Usage

check_problems(
  df,
  check = c("site_id", "aru_id", "date", "date_time", "longitude", "latitude"),
  path = FALSE,
  date = FALSE
)

Arguments

`df`	Data frame. Either meta data (`clean_metadata()`) or GPS coordinates (`clean_gps()`)
`check`	Character. Character vector of columns to check for missing values. Default is `site_id`, `aru_id`, `date`, `date_time`, `longitude` and `latitude`.
`path`	Logical. Whether to return just the file paths which have missing attributes. Default `FALSE`
`date`	Logical. Whether to summarize output by date (as well as `site_id` and `aru_id`. Default `FALSE`.

Value

A data frame summarizing the metadata by site_id, aru_type, aru_id, and (optionally) by date. Presents the number of files, directories, and days worth of recordings, as well as the minimum and maximum recording times.

Examples


m <- clean_metadata(project_files = example_files, pattern_aru_id = "test")

check_problems(m)
check_problems(m, date = TRUE)
check_problems(m, path = TRUE)