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R: Linear mixed models for data matrix
...data. Wald type 2 Chi-squared test is used to calculate p-values. Usage lmmSeq( modelFormula, maindata, metadata, id = NULL, offset = NULL, test.stat = c("Wald", "F", "LRT"), reduced = NULL, modelData...
/CRAN/refmans/glmmSeq/html/lmmSeq.html
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R: GLMM with negative binomial distribution for sequencing count...
...of RNA-Sequencing count data. Usage glmmSeq( modelFormula, countdata, metadata, id = NULL, dispersion = NA, sizeFactors = NULL, reduced = NULL, modelData = NULL, designMatrix = NULL, method = c("lme4", ...
/CRAN/refmans/glmmSeq/html/glmmSeq.html
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R: PStrata: Principal STRATification Analysis for Data with...
...presense of post-treatment confounding using principal stratification. It provides an interface to fit the Bayesian principal stratification model, which is a complex mixture model, using Stan, a C++...
/CRAN/refmans/PStrata/html/PStrata-package.html
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R: Bayesian Regression Models using 'Stan'
...inference (see https://mc-stan.org/). The formula syntax is an extended version of the syntax applied in the lme4 package to provide a familiar and simple interface for performing regression analyses.
/CRAN/refmans/brms/html/brms-package.html
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Introduction to immunarch
...improving design of T-cell therapies using multi-omics and AI. Research and biopharma partnerships, more details: immunomind.com support@immunomind.io Introduction Installation Latest release on...
/CRAN/packages/immunarch/vignettes/v1_introduction.html
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R: Find and plot various reliability/gneralizability...
...Various indicators of reliability of multilevel data (e.g., items over time nested within subjects) may be found using generalizability theory. A basic three way anova is applied to the data from...
/CRAN/refmans/psych/html/multilevel.reliability.html
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README
...longitudinal sub-models are specified by generalised linear mixed models (GLMMs). The joint models are fit via maximum likelihood using an approximate EM algorithm first proposed by Bernhardt et al.
/CRAN/packages/gmvjoint/readme/README.html
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Using partR2
...partR2 Martin A. Stoffel, Shinichi Nakagawa, Holger Schielzeth partR2 package The goal of partR2 is to partition the variance explained in generalized linear mixed models (GLMMs) into variation unique...
/CRAN/packages/partR2/vignettes/Using_partR2.html
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Getting started
...be aware that no instruments have yet been validated for individual application. For more background, see the introductory booklet D-score: Turning milestones into measurement. This vignette shows how...
/CRAN/packages/dscore/vignettes/getting_started.html
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The RAppArmor Package: Enforcing Security Policies in R Using Dynamic Sandboxing on Linux
...November 2013, Volume 55, Issue 7. http://www.jstatsoft.org/ The RAppArmor Package: Enforcing Security Policies in R Using Dynamic Sandboxing on Linux Jeroen Ooms University of California, Los Angeles...
/CRAN/packages/RAppArmor/vignettes/v55i07.pdf
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README
...lme4 to provide a familiar and simple interface for performing regression analyses. A wide range of response distributions are supported, allowing users to fit – among others – linear, robust...
/CRAN/packages/brms/readme/README.html
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/CRAN/packages/mlmRev/vignettes/MlmSoftRev.pdf
...Core Team Douglas.Bates@R-project.org February 2005, with updates up to April 5, 2020 Abstract The Center for Multilevel Modelling at the Institute of Education, London maintains a web site...
/CRAN/packages/mlmRev/vignettes/MlmSoftRev.pdf
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NEWS
...multilevel.icc(), and multilevel.descript() which caused an error message in three-level data with ambiguously coded cluster variables common in longitudinal data. User-visible changes Revised...
/CRAN/packages/misty/news/news.html
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/CRAN/packages/marked/NEWS
...etc to fix warnings/notes on CRAN check. marked 1.2.7 2 August 2020 ----------------- NEW * added argument unit_scale to crm, predict.crm, and compute_real. If set to FALSE the real value estimates...
/CRAN/packages/marked/NEWS
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/CRAN/packages/Rcmdr/vignettes/Empezando-con-Rcmdr-es.pdf
...2020). Este manual es una introducción breve y básica a R Commander, para una documentación más extensa véase Fox (2017), que tiene un sitio web en <socserv.mcmaster.ca/jfox/Books/RCommander/ ...
/CRAN/packages/Rcmdr/vignettes/Empezando-con-Rcmdr-es.pdf
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NEWS
...Bug fixes Functions like find_variables() or clean_names() now support multi-membership formulas for models from brms. Updated tests to work with the latest changes in glmmTMB 1.1.9. insight 0.19.9...
/CRAN/packages/insight/news/news.html
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/CRAN/packages/fortunes/vignettes/fortunes.pdf
...Wisdom December 29, 2016 1 2 Okay, let’s stand up and be counted: who has been writing diamond graph code? Mine’s 60 lines. —Barry Rowlingson (in a discussion about the patent for diamond graphs)...
/CRAN/packages/fortunes/vignettes/fortunes.pdf
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/CRAN/packages/TripleR/vignettes/TripleR-knitr.pdf
Round robin analyses in R: How to use TripleR Felix D. Schönbrodt∗ Stefan C. Schmukle² Mitja D. Back³ April 25, 2022 Contents 1 Installing R and TripleR .
/CRAN/packages/TripleR/vignettes/TripleR-knitr.pdf
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mediation: R Package for Causal Mediation Analysis
...Dustin Tingley Teppei Yamamoto Kentaro Hirose Luke Keele Harvard MIT Princeton Penn State Kosuke Imai Princeton Abstract In this paper, we describe the R package mediation for conducting causal...
/CRAN/packages/mediation/vignettes/mediation.pdf
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/CRAN/packages/Rcmdr/vignettes/Getting-Started-with-the-Rcmdr.pdf
...the R Commander; for more extensive documentation, see Fox (2017), which has a website at <socserv.mcmaster.ca/jfox/Books/RCommander/> or <tinyurl.com/RcmdrBook>. R is a command-driven system, and new ...
/CRAN/packages/Rcmdr/vignettes/Getting-Started-with-the-Rcmdr.pdf
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