|
|
R: Latent Class Capture-Recapture Models
...Class Capture-Recapture Models Documentation for package ‘LCCR’ version 1.3 DESCRIPTION file. Help Pages LCCR-package Latent Class Capture-Recapture Models aggr_data Aggregate capture-recapture...
/CRAN/refmans/LCCR/html/00Index.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Group individual capture-recapture data in encounter...
...encounter capture-recapture history. Usage group_data(X, effX) Arguments X matrix of capture-recapture histories effX vector with numbers of individuals with that particular capture-recapture history...
/CRAN/refmans/R2ucare/html/group_data.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Group individual capture-recapture data in encounter...
...pools together individuals with the same encounter capture-recapture history along specified directions given by columns. Usage group_data_gen(X, effX, s) Arguments X matrix of capture-recapture...
/CRAN/refmans/R2ucare/html/group_data_gen.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Ungroup encounter capture-recapture data in individual...
...of encounter capture-recapture histories effX vector with numbers of individuals with that particular encounter history Value matrix with ungrouped capture-recapture histories and counts in the last...
/CRAN/refmans/R2ucare/html/ungroup_data.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Bayesian Non-Parametric Latent-Class Capture-Recapture
...Pages LCMCR-package Capture-Recapture Estimation using Bayesian Nonparametric latent-class models kosovo_aggregate Killings in the Kosovo war from March 20 to June 22, 1999. LCMCR Capture-Recapture...
/CRAN/refmans/LCMCR/html/00Index.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Capture-Recapture Estimation using Bayesian Model Averaging
...Model Averaging bma.cr Bayesiam Model Averaging for Capture-Recapture cfunction A Helper Function for make.strata check.strata Checks Each Stratum for Suitability for Capture-Recapture circle A Helper...
/CRAN/refmans/dga/html/00Index.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Convert capture-recapture configurations into frequency data
freq_data {LCCR} R Documentation Convert capture-recapture configurations into frequency data Description Given a matrix of observed capture-recapture configurations, convert...
/CRAN/refmans/LCCR/html/freq_data.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Goodness-of-Fit Tests for Capture-Recapture Models
...Deviance of multinomial mixture distributions expval_table Expected values in a contingency table gof_test Goodness-of-fit test for contingency tables group_data Group individual capture-recapture...
/CRAN/refmans/R2ucare/html/00Index.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Loglinear Models for Capture-Recapture Experiments
...for Capture-Recapture Experiments BBS2001 Species Richness Data from the North American Breeding Bird Survey (BBS) in 2001 boxplot.closedp Loglinear Models for Closed Population Capture-Recapture...
/CRAN/refmans/Rcapture/html/00Index.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Epidemiological capture-recapture Data on HIV
...{Rcapture} R Documentation Epidemiological capture-recapture Data on HIV Description Epidemiological capture-recapture data on HIV from four reporting centers in Rome, Italy. Usage HIV Format 15 by 5...
/CRAN/refmans/Rcapture/html/HIV.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Epidemiological capture-recapture Data on the lesbian...
...capture-recapture Data on the lesbian population Description Epidemiological capture-recapture data on the lesbian population from four four organisations that serve the lesbian and gay population...
/CRAN/refmans/Rcapture/html/lesbian.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Aggregate capture-recapture data
...(affecting the class weights and the conditional capture probabilities given the latent class), the function aggregates data, providing a stratified capture-recapture format. Usage aggr_data(Y, W...
/CRAN/refmans/LCCR/html/aggr_data.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Spatially Explicit Capture-Recapture by Inverse Prediction
...for ipsecr.fit detectionDesignData Internal Functions fixedbeta Detail Specification for ipsecr.fit ipsecr Spatially Explicit Capture-Recapture by Inverse Prediction ipsecr-defunct Defunct ...
/CRAN/refmans/ipsecr/html/00Index.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Spatially Explicit Capture-Recapture for Linear Habitats
...Capture-Recapture for Linear Habitats addedges Interactive Edge Edit arvicola Water Vole Capture Dataset asgraph Utility Functions branched Utility Functions checkmoves Check Movements cleanskips...
/CRAN/refmans/secrlinear/html/00Index.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Estimators for Two-Sample Capture-Recapture Studies
...Estimating abundance of outgoing smolt - BTSPAS - diagonal case data_btspas_nondiag1 Estimating abundance of salmon - BTSPAS - non-diagonal case data_kokanee_tagloss Capture-recapture on Kokanee...
/CRAN/refmans/Petersen/html/00Index.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Gibbs sampling for the Arnason-Schwarz capture-recapture...
gibbscap2 {bayess} R Documentation Gibbs sampling for the Arnason-Schwarz capture-recapture model Description In the Arnason-Schwarz capture-recapture model (see Chapter 5), individual histories are...
/CRAN/refmans/bayess/html/gibbs3.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Open Population Capture-Recapture Models
...Open Population Capture–Recapture Models Description Functions for non-spatial open population analysis by Cormack-Jolly-Seber (CJS) and Jolly-Seber-Schwarz-Arnason (JSSA) methods, and by spatially...
/CRAN/refmans/openCR/html/openCR-package.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Closed Population Capture-Recapture Model Mtb
...Population Capture-Recapture Model Mtb Description This function fits model Mtb for closed populations in capture-recapture experiments. Usage closedp.Mtb(X, dfreq=FALSE, method = "BFGS", ...) ## S3...
/CRAN/refmans/Rcapture/html/closedp.Mtb.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Open Population Capture-Recapture
...Capture-Recapture Models age.matrix Session-specific Ages AIC.openCR Compare openCR Models AIC.openCRlist Compare openCR Models bd.array Summarise Non-spatial Open-population Data classMembership...
/CRAN/refmans/openCR/html/00Index.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Estimate the Population Size for the Mb Capture-Recapture Model
...the Population Size for the Mb Capture-Recapture Model Documentation for package ‘OBMbpkg’ version 1.0.0 DESCRIPTION file. Help Pages OBMb Objective Bayesian Analysis for the Mb Capture-Recapture...
/CRAN/refmans/OBMbpkg/html/00Index.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Estimate Asymptomatic Cases via Capture/Recapture Methods
...version 1.1.0 DESCRIPTION file. User guides, package vignettes and other documentation. Package NEWS. Help Pages estimate_asympto Estimate the proportion of asymptomatic cases by capture/recapture
/CRAN/refmans/asymptor/html/00Index.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Capture-recapture Models
capture {repeated} R Documentation Capture-recapture Models Description capture fits the Cormack capture-recapture model to n sample periods. Set n to the appropriate value and type eval(setup).
/CRAN/refmans/repeated/html/capture.html
cran-help matching:
:capture, :capture, capture, :recapture and recapture |
|
|
R: Capture-Recapture Estimation using Bayesian Nonparametric...
...Capture-Recapture Estimation using Bayesian Nonparametric latent-class models Description This package implements a fully Bayesian multiple-recapture method for estimating the unknown size...
/CRAN/refmans/LCMCR/html/LCMCR-package.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Capture-recapture confidence interval function
...Capture-recapture confidence interval function Description Compute a confidence interval for a capture-recapture sample using the method of Cormack (1992). Usage captureci(xmat, y, alpha) Arguments...
/CRAN/refmans/SDAResources/html/captureci.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Latent Class Capture-Recapture Models
...with individual covariates for capture-recapture data. See Forcina and Bartolucci (2021)<arxiv:2106.03811>. Details The package provides functions to specify latent class models for capture-recapture...
/CRAN/refmans/LCCR/html/LCCR-package.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Read capture-recapture data with Headed format used by...
...Read capture-recapture data with Headed format used by program E-SURGE Description This function reads in capture-recapture dataset with the Headed format. It ignores all forms of censorship for now...
/CRAN/refmans/R2ucare/html/read_headed.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Sampling Design for Spatially Explicit Capture-Recapture
...Spatially Explicit Capture-Recapture Documentation for package ‘secrdesign’ version 2.9.1 DESCRIPTION file. Package NEWS. Help Pages secrdesign-package Spatially Explicit Capture-Recapture Study...
/CRAN/refmans/secrdesign/html/00Index.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Single-Source Capture-Recapture Models
...Capture-Recapture Models Documentation for package ‘singleRcapture’ version 0.2.1.1 DESCRIPTION file. Package NEWS. Help Pages bread.singleRStaticCountData Heteroscedasticity-Consistent Covariance...
/CRAN/refmans/singleRcapture/html/00Index.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Yukon River data used for Reverse Capture-Recapture example.
...for Reverse Capture-Recapture example. Description Data from Hamazaki, T. and DeCovich, N. (2014). Application of the Genetic Mark–Recapture Technique for Run Size Estimation of Yukon River Chinook...
/CRAN/refmans/Petersen/html/data_yukon_reverse.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Function for fitting 'VGAM' capture-recapture (CR) model...
MCEMfit_CR {refitME} R Documentation Function for fitting VGAM capture-recapture (CR) model using the MCEM algorithm Description Function for fitting VGAM capture-recapture (CR) model using the MCEM...
/CRAN/refmans/refitME/html/MCEMfit_CR.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Bayesian Nonparametric Latent Class Capture-Recapture
...Capture-Recapture Description Create and initialize an object of class lcm_CR_Basic. Usage lcmCR(captures, tabular = FALSE, in_list_label = "1", not_in_list_label = "0", K = 5, a_alpha = 0.25, b_alpha...
/CRAN/refmans/LCMCR/html/lcmCR.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Data from a capture-recapture study of fur seal pups
furseals {bisque} R Documentation Data from a capture-recapture study of fur seal pups Description These data are used in the book "Computational Statistics" by G.H. Givens and J.A. Hoeting (2013).
/CRAN/refmans/bisque/html/furseals.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Estimate population size on the basis of capture-recapture...
...capture-recapture sampling Description Estimates population size on the basis of capture-recapture sampling. Usage epi.popsize(T1, T2, T12, conf.level = 0.95, verbose = FALSE) Arguments T1 an integer...
/CRAN/refmans/epiR/html/epi.popsize.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: 3-Dimensional capture-recapture model matrices
...3-Dimensional capture-recapture model matrices Description Returns a 3D model matrix for capture-recapture modeling in the form of a (giant) 2D matrix. Usage F.3d.model.matrix(formula, d1, d2)...
/CRAN/refmans/mra/html/F.3d.model.matrix.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Read capture-recapture data with Input (.inp) format used by...
read_inp {R2ucare} R Documentation Read capture-recapture data with Input (.inp) format used by program MARK Description This function reads in capture-recapture dataset with the Input format. It...
/CRAN/refmans/R2ucare/html/read_inp.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Spatially Explicit Capture-Recapture Study Design
...Capture–Recapture Study Design Description Tools to assist the design of spatially explicit capture–recapture studies of animal populations. Details Package: secr Type: Package Version: 2.9.1 Date...
/CRAN/refmans/secrdesign/html/secrdesign-package.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Spatially Explicit Capture-Recapture Models
...Version: 4.6.6 Date: 2024-03-01 License: GNU General Public License Version 2 or later Spatially explicit capture–recapture is a set of methods for studying marked animals distributed in space.
/CRAN/refmans/secr/html/secr-package.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Capture-recapture experiment at Rodli Tarn.
...Capture-recapture experiment at Rodli Tarn. Description Ricker (1975) gives an example of work by Knut Dahl on estimating the number of brown trout (Salmo truitta) in some small Norwegian tarns.
/CRAN/refmans/Petersen/html/data_rodli.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Spatially explicit capture-recapture (secr) density...
...capture-recapture (secr) density estimation using MCMC Description Functions to estimate density from mark-recapture data using MCMC methods and JAGS. Usage Bsecr0(capthist, buffer = 100, start = NULL...
/CRAN/refmans/wiqid/html/Bsecr.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Capture-recapture experiment on Northern Pike in Mille Lacs,...
...Capture-recapture experiment on Northern Pike in Mille Lacs, MN, in 2005 with tagloss information. Description Fish were tagged on the spawning grounds and recovered in the summer gillnet assessment.
/CRAN/refmans/Petersen/html/data_NorthernPike_tagloss.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Capture-recapture experiment on Northern Pike in Mille Lacs,...
...Capture-recapture experiment on Northern Pike in Mille Lacs, MN, in 2005. Description Fish were tagged on the spawning grounds and recovered in the summer gillnet assessment. Fish were double tagged...
/CRAN/refmans/Petersen/html/data_NorthernPike.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Capture-Recapture model matrix
...Capture-Recapture model matrix Description Returns two model matrices for capture-recapture modeling. Both are in the form of (giant) 2D matrices. Usage F.cr.model.matrix(capture, survival, nan, ns)...
/CRAN/refmans/mra/html/F.cr.model.matrix.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Bobcat spatial capture-recapture data
bobcatSCR {multimark} R Documentation Bobcat spatial capture-recapture data Description Example spatial bobcat data for multimark package. Format These spatial capture-recapture data with multiple mark...
/CRAN/refmans/multimark/html/bobcatSCR.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Loglinear Models for Open Population Capture-Recapture...
...Capture-Recapture Experiments Description This function computes various demographic parameters using a loglinear model for open populations in capture-recapture experiments. Usage openp(X, dfreq...
/CRAN/refmans/Rcapture/html/openp.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Posterior expectation for the binomial capture-recapture...
pbino {bayess} R Documentation Posterior expectation for the binomial capture-recapture model Description This function provides an estimation of the number of dippers by a posterior expectation, based...
/CRAN/refmans/bayess/html/pbino.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Bayesiam Model Averaging for Capture-Recapture
...Bayesiam Model Averaging for Capture-Recapture Description This function averages over all decomposable graphical models for p lists. Usage bma.cr( Y, Nmissing, delta, graphs, logprior = NULL, log...
/CRAN/refmans/dga/html/bma.cr.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Objective Bayesian Analysis for the Mb Capture-Recapture...
...Mb Capture-Recapture Model Description Applies an objective Bayesian method on to the Mb capturere-capture model to estimate the population size N. Usage OBMb(k, n, M, x, CI1 = 0.025, CI2 = 0.975, max...
/CRAN/refmans/OBMbpkg/html/OBMb.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Spatially Explicit Capture-Recapture
...Capture-Recapture Description A wrapper for secr::secr.fit. In secr v. 4, secr.fit gains a new option, fastproximity. If TRUE, some data sets are compressed and reconfigured to run much faster. This...
/CRAN/refmans/wiqid/html/secrFit.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Spatially Explicit Capture-Recapture by Inverse Prediction
...Explicit Capture–Recapture by Inverse Prediction Description Functions to estimate the density of a spatially distributed animal population sampled with an array of passive detectors, such as traps.
/CRAN/refmans/ipsecr/html/ipsecr-package.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Capture-recapture on Kokanee in Metolius River with tag loss
...Capture-recapture on Kokanee in Metolius River with tag loss Description This is the data from Hyun et al (2012). In August and September 2007, the period just before the spawning run, adult kokanee...
/CRAN/refmans/Petersen/html/data_kokanee_tagloss.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Estimate latent class models for capture-recapture data with...
estLCCR {LCCR} R Documentation Estimate latent class models for capture-recapture data with individual covariates Description For a latent class model for stratified capture-recapture...
/CRAN/refmans/LCCR/html/estLCCR.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Simulate capture-recapture data from a latent class model...
simLCCR {LCCR} R Documentation Simulate capture-recapture data from a latent class model with individual covariates Description The function simulates capture-recapture data from a latent class model...
/CRAN/refmans/LCCR/html/simLCCR.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Dipper capture-recapture data
...Dipper capture-recapture data Description A capture-recapture data set on European dippers from France that accompanies MARK as an example analysis using the CJS and POPAN models. The dipper data set...
/CRAN/refmans/marked/html/dipper.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: CML estimation of latent class models for capture-recapture...
estLCCRcon {LCCR} R Documentation CML estimation of latent class models for capture-recapture data with individual covariates Description For a latent class model for stratified capture-recapture...
/CRAN/refmans/LCCR/html/estLCCRcon.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Loglinear Models for Capture-Recapture Experiments Carried...
...period using loglinear robust design models in capture-recapture experiments. robustd.t and robustd.0 fit the model using different response variable. robustd.t uses the frequencies of the observable...
/CRAN/refmans/Rcapture/html/robustd.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Camera Trap Data Management and Preparation of Occupancy and Spatial Capture-Recapture Analyses
Camera Trap Data Management and Preparation of Occupancy and Spatial Capture-Recapture Analyses Documentation for package ‘camtrapR’ version 2.3.0 DESCRIPTION file. User guides, package vignettes...
/CRAN/refmans/camtrapR/html/00Index.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Loglinear Models for Capture-Recapture Experiments
...Capture-Recapture Experiments Description Estimation of abundance and of other demographic parameters for closed populations, open populations and the robust design in capture-recapture experiments...
/CRAN/refmans/Rcapture/html/Rcapture.package.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Loglinear Models for Closed Population Capture-Recapture...
...Capture-Recapture Experiments Description The functions closedp.t and closedp.0 fit various loglinear models for closed populations in capture-recapture experiments. For back compatibility, closedp.t...
/CRAN/refmans/Rcapture/html/closedp.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Capture-recapture data for European dippers
...Capture-recapture data for European dippers Description A data set that accompanies Program MARK and is included in the RMark package in a different format under the name dipper. Usage data(dippers)...
/CRAN/refmans/wiqid/html/data_dippers.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Checks Each Stratum for Suitability for Capture-Recapture
...Stratum for Suitability for Capture-Recapture Description Takes in list intersection counts and source list totals as produced by make.strata. It then checks whether there are between three and five...
/CRAN/refmans/dga/html/check.strata.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Stratify Capture-Recapture Data
...Stratify Capture-Recapture Data Description Arrange existing capthist data in stratified form. Usage stratify(..., intervals = NULL, MoreArgs = list(), covariate = NULL, bytraps = FALSE) Arguments ...
/CRAN/refmans/openCR/html/stratify.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Spatially Explicit Capture-Recapture for Linear Habitats
...Capture–Recapture for Linear Habitats Description An secr add-on package for linear habitat models. Details Package: secrlinear Type: Package Version: 1.2.2 Date: 2023-10-17 License: GNU General...
/CRAN/refmans/secrlinear/html/secrlinear-package.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Capture-Recapture Estimation using Bayesian Model Averaging
dga-package {dga} R Documentation Capture-Recapture Estimation using Bayesian Model Averaging Description Performs Bayesian model averaging over all decomposable graphical models, each representing...
/CRAN/refmans/dga/html/dga-package.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Spatially Explicit Capture-Recapture by Inverse Prediction
...Explicit Capture–Recapture by Inverse Prediction Description Estimate population density by simulation and inverse prediction (Efford 2004; Efford, Dawson & Robbins 2004). A restricted range of SECR...
/CRAN/refmans/ipsecr/html/ipsecr.fit.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Generate a 'capthist' object for spatial capture-recapture...
...for spatial capture-recapture analyses from camera-trapping data Description This function generates spatial detection histories of individuals of a species for spatial capture-recapture analyses...
/CRAN/refmans/camtrapR/html/spatialDetectionHistory.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Spatial Capture-Recapture (SCR) Methods Using 'nimble'
Spatial Capture-Recapture (SCR) Methods Using 'nimble' Documentation for package ‘nimbleSCR’ version 0.2.1 DESCRIPTION file. User guides, package vignettes and other documentation. Package NEWS.
/CRAN/refmans/nimbleSCR/html/00Index.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Regression fitting in single source capture-recapture models
...capture-recapture models Description estimatePopsizeFit does for estimatePopsize what glm.fit does for glm. It is internally called in estimatePopsize. Since estimatePopsize does much more than just...
/CRAN/refmans/singleRcapture/html/estimatePopsizeFit.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Spatially Explicit Capture-Recapture
...M N O P R S T U V W X misc secr-package Spatially Explicit Capture-Recapture Models -- A -- addCovariates Add Covariates to Mask or Traps addSightings Mark-resight Data addTelemetry Combine Telemetry...
/CRAN/refmans/secr/html/00Index.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Spatially Explicit Capture-Recapture
...Spatially Explicit Capture–Recapture Description Estimate animal population density with data from an array of passive detectors (traps) by fitting a spatial detection model by maximizing the...
/CRAN/refmans/secr/html/secr.fit.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Fit Open Population Capture-Recapture Model
...Capture–Recapture Model Description Nonspatial or spatial open-population analyses are performed on data formatted for ‘secr’. Several parameterisations are provided for the nonspatial Jolly-...
/CRAN/refmans/openCR/html/openCR.fit.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Capture-recapture model fitting function
...Capture-recapture model fitting function Description Fits user specified models to some types of capture-recapture wholly in R and not with MARK. A single function that processes data, creates the...
/CRAN/refmans/marked/html/crm.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Single source capture-recapture models
estimatePopsize {singleRcapture} R Documentation Single source capture-recapture models Description estimatePopsize first fits appropriate (v)glm model and then estimates full (observed and unobserved)...
/CRAN/refmans/singleRcapture/html/estimatePopsize.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Capture-Mark-Recapture Analysis using Multiple Non-Invasive Marks
...-Invasive Marks Documentation for package ‘multimark’ version 2.1.6 DESCRIPTION file. Package NEWS. Help Pages bobcat Bobcat data bobcatSCR Bobcat spatial capture-recapture data getdensityClosedSCR...
/CRAN/refmans/multimark/html/00Index.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: F.huggins.estim - Estimation of Huggins closed population...
F.huggins.estim {mra} R Documentation F.huggins.estim - Estimation of Huggins closed population capture-recapture model. Description Estimates Huggin's closed population capture-recapture models...
/CRAN/refmans/mra/html/F.huggins.estim.html
cran-help matching:
capture and recapture |
|
|
R: Mark-Recapture Analysis
...Cormack F.cjs.estim - Cormack-Jolly-Seber estimation cr.estim F.cjs.estim - Cormack-Jolly-Seber estimation dipper.data European Dipper data dipper.histories European Dipper data dipper.males European...
/CRAN/refmans/mra/html/00Index.html
cran-help matching:
capture, :recapture and recapture |
|
|
R: Snowshoe Hare Data
...Snowshoe Hare Data Description This data set contains capture-recapture data for snowshoe hares. Usage hare Format 68 by 6 numeric matrix, with the following columns: c1, c2, c3, c4, c5, c6 Capture...
/CRAN/refmans/Rcapture/html/hare.html
cran-help matching:
capture and recapture |
|
|
R: Salamander Capture-mark-recapture Data
...Spotted Salamanders (Ambystoma maculatum) recorded by Husting (1965). A total of 1244 unique individuals were captured in pitfall traps at a breeding site between 1959 and 1963. Usage data(salamander)...
/CRAN/refmans/AICcmodavg/html/salamander.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Capture histories (2 sample) of Humpback Whitefish.
...for Humpback Whitefish (Coregonus pidschian) greater than 360 mm in the Chatanika River, AK in 2012. Format A data frame with 1920 observations on the following 4 variables: sectMrun Section where the...
/CRAN/refmans/FSAdata/html/HumpbackWFCR.html
cran-help matching:
:capture, capture and recapture |
|
|
R: Compute multinomial cell probabilities
...are customized for the examples in chapter 7 of AHM1 and only allow for 3 capture occasions. See makePiFuns for functions to construct piFuns with more occasions. Usage instRemPiFun(p) crPiFun(p) ...
/CRAN/refmans/AHMbook/html/piFuns.html
cran-help matching:
capture and recapture |
|
|
R: European Dipper data
...capture-recapture data from a study of European dippers. Usage data(dipper.data) Format A data frame containing 294 capture histories and the sex designation of birds captured. Capture indicators are...
/CRAN/refmans/mra/html/dipper.data.html
cran-help matching:
capture and recapture |
|
|
R: Survival from mark-recapture data with robust design
...collected using Pollock's robust design, ie, with multiple capture occasions within each season, where the population is closed within each season. Function survRDah implements the second stage of...
/CRAN/refmans/wiqid/html/survivalRD.html
cran-help matching:
capture, :recapture and recapture |
|
|
R: MRA - Mark Recapture Analysis
...associated routines, to conduct analyses of mark-recapture (capture-recapture) data using individual, time, and individual-time varying covariates. In general, these routines relate vectors of capture...
/CRAN/refmans/mra/html/mra-package.html
cran-help matching:
capture, :recapture and recapture |
|
|
R: The yellow-bellied Prinia _Prinia flaviventris_...
Priniadata {refitME} R Documentation The yellow-bellied Prinia Prinia flaviventris capture-recapture data Description Data set consisting of capture-recapture histories 164 uniquely captured birds...
/CRAN/refmans/refitME/html/Priniadata.html
cran-help matching:
capture and recapture |
|
|
R: Gonodontis Moths
...Moths Description Non-spatial open-population capture–recapture data of Bishop et al. (1978) for nonmelanic male Gonodontis bidentata at Cressington Park, northwest England. Usage gonodontisCH...
/CRAN/refmans/openCR/html/gonodontis.html
cran-help matching:
capture and recapture |
|
|
R: Capture histories (2 samples) of Bluegill from Jewett Lake,...
BluegillJL {FSA} R Documentation Capture histories (2 samples) of Bluegill from Jewett Lake, MI. Description Each line consists of the capture history over two samples of Bluegill (Lepomis macrochirus)...
/CRAN/refmans/FSA/html/BluegillJL.html
cran-help matching:
:capture, capture and recapture |
|
|
R: Newt Capture-mark-recapture Data
...Red-spotted Newts (Notophthalmus viridescens) recorded by Gill (1985). A total of 1079 unique individuals were captured in pitfall traps at a breeding site (White Oak Flat pond, Virginia) between 1975...
/CRAN/refmans/AICcmodavg/html/newt.html
cran-help matching:
:capture, capture, :recapture and recapture |
|
|
R: Data to support the FSA package.
...common fisheries stock assessment methods described in the FSA package and on the fishR website. The help files for these datasets are embedded with topics that can be searched to find data files that...
/CRAN/refmans/FSAdata/html/FSAdata.html
cran-help matching:
capture and recapture |
|
|
R: Data for barn swallows in Switzerland, 1997-2003
...year the number of breeding pairs and detailed information about productivity from regular checks of the nests were recorded. Nestlings were ringed and adults captured, resulting in capture-recapture...
/CRAN/refmans/IPMbook/html/data_swallow.html
cran-help matching:
capture and recapture |
|
|
R: Closed population estimates
...several conventional non-spatial capture–recapture methods. Usage closedN(object, estimator = NULL, level = 0.95, maxN = 1e+07, dmax = 10 ) Arguments object capthist object estimator character; name...
/CRAN/refmans/secr/html/closedN.html
cran-help matching:
capture and recapture |
|
|
R: European Dipper dataset
...capture-recapture dataset on the European dipper bird covers 7 years (1981-1987 inclusive) of observations of captures within one of three zones. It is used in Chapter 5. Usage data(eurodip) Format A...
/CRAN/refmans/bayess/html/eurodip.html
cran-help matching:
capture and recapture |
|
|
R: Profile Likelihood Confidence Interval for Abundance...
...computes the multinomial profile likelihood for the abundance of some closed population capture-recapture models. Usage profileCI(X, dfreq=FALSE, m="M0", h="Chao", a=2, mX=NULL, mname="Customized ...
/CRAN/refmans/Rcapture/html/profileCI.html
cran-help matching:
capture and recapture |
|
|
R: Possible Capture Histories
...histpos.t builds the matrix of observable capture histories in terms of captures and misses for a capture-recapture experiment with t capture occasions. histpos.0 builds the matrix of observable...
/CRAN/refmans/Rcapture/html/histpos.html
cran-help matching:
:capture, capture and recapture |
|
|
R: Summarized multiple mark-recapture data for all Northern Pike...
...Marsh, NY. Description Summary results of capture histories (number captured, number of recaptured fish, and number of unmarked fish that were marked) for all Buckhorn Marsh Northern Pike (Esox lucius).
/CRAN/refmans/FSA/html/PikeNY.html
cran-help matching:
capture, :recapture and recapture |
|
|
R: Descriptive Statistics
...produces descriptive statistics for capture-recapture data. Usage descriptive(X, dfreq=FALSE, dtype=c("hist","nbcap"), t=NULL) ## S3 method for class 'descriptive' print(x, ...) ## S3 method for class...
/CRAN/refmans/Rcapture/html/descriptive.html
cran-help matching:
capture and recapture |
|
|
R: Summarized multiple mark-recapture data for Walleye from four...
...Walleye (Sander vitreus) collected from four lakes in Northern Minnesota, USA. Format A data frame with 20 observations on the following 5 variables. lake Studied lake (Crooked, Fourmile, Island, Tom)...
/CRAN/refmans/FSAdata/html/WalleyeMN06b.html
cran-help matching:
capture, :recapture and recapture |
|
|
R: Capture histories (2 sample) of Rainbow Trout.
...(1=captured) second Indicator variable for the second sample (1=captured) Topic(s) Population Size Abundance Mark-Recapture Capture-Recapture Petersen Capture History Source Simulated from Table 10 in...
/CRAN/refmans/FSAdata/html/RBTroutUNSP.html
cran-help matching:
:capture, capture and recapture |
|
|
R: Bayesian Essentials with R
...capture-recapture model ARllog log-likelihood associated with an AR(p) model defined either through its natural coefficients or through the roots of the associated lag-polynomial ARmh Metropolis-...
/CRAN/refmans/bayess/html/00Index.html
cran-help matching:
capture and recapture |
|
|
R: Capture histories (9 samples) of Cutthroat Trout from Auke...
...2 variables. ch Unique capture history (as a character string) freq Frequency of fish with that capture history Topic(s) Population Size Abundance Mark-Recapture Capture-Recapture Jolly-Seber ...
/CRAN/refmans/FSAdata/html/CutthroatALf.html
cran-help matching:
:capture, capture and recapture |
|
|
R: Capture histories (4 samples) of a subset of Northern Pike...
...of a subset of Northern Pike from Buckthorn Marsh. Description Capture histories (4 samples), in capture-by-date format, of a subset of Northern Pike from Buckthorn Marsh. Format A data frame with 69...
/CRAN/refmans/FSAdata/html/PikeNYPartial2.html
cran-help matching:
:capture, capture and recapture |
|
|
R: Closure tests
...Perform tests to determine whether a population sampled by capture-recapture is closed to gains and losses over the period of sampling. Usage closure.test(object, SB = FALSE, min.expected = 2)...
/CRAN/refmans/secr/html/closure.html
cran-help matching:
capture and recapture |