LDprofile {zalpha}R Documentation

Dataset containing an example LD profile

Description

A simulated LD profile, containing example LD statistics for genetic distances of 0 to 0.0049, in bins of size 0.0001.

Usage

data(LDprofile)

Format

A data frame with 50 rows and 5 variables:

bin

the lower bound of each bin

rsq

the expected r^2 value for a pair of SNPs, where the genetic distance between them falls in the given bin

sd

the standard deviation of the expected r^2 value

Beta_a

the first shape parameter for the Beta distribution fitted for this bin

Beta_b

the second shape parameter for the Beta distribution fitted for this bin


[Package zalpha version 0.3.0 Index]