taxtable {yatah} | R Documentation |
Taxonomic table
Description
Compute taxonomic table from lineages.
Usage
taxtable(lineage)
Arguments
lineage |
string. Vector of lineages. |
Details
Duplicated lineages are removed.
Value
A data.frame with columns corresponding to different ranks.
Examples
lineage1 <- "k__Bacteria|p__Verrucomicrobia|c__Verrucomicrobiae"
lineage2 <- "k__Bacteria|p__Firmicutes|c__Clostridia"
lineage3 <- "k__Bacteria|p__Firmicutes|c__Bacilli"
taxtable(c(lineage1, lineage2, lineage3))
[Package yatah version 1.0.0 Index]