CodonChoiceBiasesDeprecated {xegaGeGene}

Biases in Rule Choice (Deprecated)

Description

See CodonChoiceBiases. The use of the outer product leads to memory problems for precision>31 and becomes slow for precision>24.

Usage

CodonChoiceBiasesDeprecated(cv, precision)

Arguments

cv

Choice vector of grammar.

precision

Number of bits of codon.

Value

Data frame with the following columns

• $precision: Number of bits.

• $cv: i-th element of choice vector.

• $dp: Deviation from choice with equal probability for $precision.

• $dH: Entropy difference between choice with equal probability and biased choice for $precision.

See Also

Other Diagnostics: CodonChoiceBiases(), CodonPrecision(), tLCM()

Examples

 CodonChoiceBiasesDeprecated(c(1, 2, 3, 5), 3)
 CodonChoiceBiasesDeprecated(c(1, 2, 3, 5), 5)