shortSoftwName {wrProteo}

Get Short Names of Proteomics Quantitation Software

Description

Get/convert short names of various proteomics quantitation software names. A 2-letter abbreviation will be returned

Usage

shortSoftwName(
  x,
  tryAsLower = TRUE,
  silent = FALSE,
  debug = FALSE,
  callFrom = NULL
)

Arguments

x

(character) 'mono' or 'average'

tryAsLower

(logical)

silent

(logical) suppress messages

debug

(logical) additional messages for debugging

callFrom

(character) allow easier tracking of messages produced

Value

This function returns a vector with masses for all amino-acids (argument 'massTy' to switch from mono-isotopic to average mass)

See Also

massDeFormula, convToNum

Examples

shortSoftwName(c("maxquant","DIANN"))