Continuous Mapping of Genetic Diversity

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Documentation for package ‘wingen’ version 2.1.1

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

circle_gd	Create a moving window map of genetic diversity using a circle window
circle_general	General function for making circular moving window maps
coords_to_raster	Create a raster from coordinates
get_geodist	Get a matrix of geographic distances for circle_gd
get_resdist	Get a matrix of resistance distances for resist_gd
ggplot_count	Plot moving window map of sample counts
ggplot_gd	Plot moving window map of genetic diversity
krig_gd	Krige moving window maps
load_middle_earth_ex	Middle earth example
load_mini_ex	Mini middle earth example
lotr_coords	Middle earth example coordinates
lotr_lyr	Middle earth example raster
lotr_range	Middle earth example range polygon
lotr_vcf	Middle earth example vcf
mask_gd	Mask moving window maps
mini_coords	Mini middle earth example coordinates
mini_lyr	Mini middle earth example raster
mini_vcf	Mini middle earth example vcf
mini_vcf_NA	Mini middle earth example vcf with NA values
plot_count	Plot moving window map of sample counts
plot_gd	Plot moving window map of genetic diversity
preview_gd	Preview moving window and sample counts
resist_gd	Create a moving window map of genetic diversity based on resistance
resist_general	General function for making resistance-based maps
vcf_to_dosage	Convert a vcf to a dosage matrix
window_gd	Create a moving window map of genetic diversity
window_general	General function for making moving window maps