wildlifeDI-package {wildlifeDI}R Documentation

wildlifeDI: Calculate Indices of Dynamic Interaction for Wildlife Tracking Data

Description

Dynamic interaction refers to spatial-temporal associations in the movements of two (or more) animals. This package provides tools for calculating a suite of indices used for quantifying dynamic interaction with wildlife telemetry data. For more information on each of the methods employed see the references within. The package (as of version 0.3) also has new tools for automating contact analysis in large tracking datasets. In the most recent update the package (v1.0 onwards) has switched and now uses the new 'move2' class of trajectory objects. There is support for converting ltraj objects to move2 objects.

Details

The package wildlifeDI allows users to compute a number of currently available indices of dynamic interaction useful for wildlife telemetry studies. The currently available methods include:

The package wildlifeDI also provides useful functionality for identifying which fixes are temporally simultaneous, required for many of the above methods, using the function GetSimultaneous, along with other functions for exploring spatial-temporal interactions patterns in wildlife telemetry data.

When citing this package please use citation('wildlifeDI), also please cite the appropriate papers associated with individual methods being used.

As of version 0.4.1 the package also includes a number of new functions for performing contact analysis with larger tracking datasets. These functions use a prefix 'con' to distinguish them from other functions in the package.

As of version 1.0 the package has completely switched to use the more modern move2 trajectory objects. This has rendered many of the helper and summary functions unnecessary and they have been removed from the package. See the vignettes for guidance on how to leverage the new move2 objects for studying dynamic interactions in wildlife tracking data.

The functions in wildlifeDI utilize the move2 objects from the package move2. For more information on objects of this type see help(mt_as_move2).

Author(s)

Jed Long


[Package wildlifeDI version 1.0.0 Index]