getRoiMeasurements {vprr}

THIS FUNCTION HAS BEEN DEPRECATED

Description

pull roi measurements from all taxa, all files

Usage

getRoiMeasurements(taxafolder, nchar_folder, unit = "mm", opticalSetting)

Arguments

taxafolder

path to taxa folder (base – autoid folder)

nchar_folder

number of characters in basepath

unit

unit data will be output in, 'mm' (default – millimetres) or 'px' (pixels)

opticalSetting

VPR optical setting determining conversion between pixels and millimetres (options are 'S0', 'S1', 'S2', or 'S3')

Note

This function is very finicky, easily broken because it relies on character string splitting. taxaFolder argument should not end in a backslash, please check output carefully to ensure taxa names or ROI numbers have been properly sub string'd