compareSimulations {virtualPollen}

Compares different simulations produced by simulatePopulation.

Description

Plots together the results of different virtual taxa produced by a single run of simulatePopulation.

Usage

compareSimulations(
  simulation.output = NULL,
  species = "all",
  filename = NULL,
  columns = "Pollen",
  time.zoom = NULL,
  width = 12,
  text.size = 20,
  title.size = 25,
  plot.title = ""
  )

Arguments

simulation.output

list, output of simulatePopulation.

species

a number or vector or numbers representing rows in the parameters dataframe, or a string or vector of strings referencing to the "label" column of the parameters dataframe.

filename

character string, name of output pdf file. If NULL or empty, no pdf is produced.

columns

character string or vector of character strings with these possible values: "Pollen", "Population.mature", "Population.immature", "Population.viable.seeds", "Suitability", "Biomass.total", "Biomass.mature", "Biomass.immature", "Mortality.mature", "Mortality.immature", "Driver.A", "Driver.B".

time.zoom

vector of two numbers, indicating the beginnign and end of the time interval to be plotted (i.e. "c(5000, 10000)")

width

plot width in inches.

text.size

text size of the plot.

title.size

plot title size.

plot.title

character string to use as plot title.

Details

The user can decide what virtual taxa to plot through the species argument, and what information to show throught the columns argument. Output is plotted on screen by default, and printed to pdf if the filename argument is filled.

Author(s)

Blas M. Benito <[e-mail]>

See Also

simulatePopulation, plotSimulation

Examples

#getting example data
data(simulation)

#compare taxa 1, 2, and 3.
compareSimulations(simulation.output = simulation,
 species = c(1, 2, 3),
 columns = c("Pollen", "Suitability"),
 time.zoom = c(1000, 2000)
)