getPoolsComparisionTable {vectorsurvR}

Get Pools Frequency Table

Description

'getPoolsComparisionTable()' produces a frequency table for positive, negative, and pending pools counts by year and species. The more years present in the data, the larger the table.

Usage

getPoolsComparisionTable(
  pools,
  interval,
  target_disease,
  species_separate = FALSE
)

Arguments

pools

Pools data retrieved from 'getPools()'

interval

Calculation interval for comparison table, accepts “collection_date”,“Biweek”,“Week”, and “Month

target_disease

The disease to calculate infection rate for–i.e. “WNV”. Disease acronyms are the accepted input. To see a list of disease acronyms, run 'unique(pools$target_acronym)'

species_separate

Should the pools comparison be split by species of each pool. Default is FALSE

Value

Frequency table of for pools data

Examples

getPoolsComparisionTable(sample_pools,
                         interval = "Biweek",
                         target_disease = "WNV",
                          species_separate = TRUE)