ve {vaxpmx} | R Documentation |
Vaccine efficacy estimation
Description
Calculates vaccine efficacy and confidence interval as described in Dudasova et al., 2024, BMC Med Res Methodol
Usage
ve(Fit, Data, nboot = 2000)
Arguments
Fit |
an object of class inheriting from |
Data |
a data frame containing the variables in the fitted model; data must include a column called "vaccine" with binary indicator of vaccination status |
nboot |
a numeric value for number of bootstrap samples for confidence interval construction |
Value
a value of vaccine efficacy VE
and lower and upper bound of confidence interval CI
Examples
# Load an example dataset
data(data_temp)
# Fit logistic model relating neutralizing titer to disease status
logisticFit <- glm(disease_any ~ nAb1, data = data_temp, family = binomial())
# Estimate vaccine efficacy and 95\% confidence interval based on the fitted model
ve(logisticFit, data_temp, nboot = 500)
[Package vaxpmx version 0.0.3 Index]