get.base.substitution {varitas}

Get base substitution

Description

Get base substitution represented by pyrimidine in base pair. If more than one base in REF/ALT (i.e. MNV or indel rather than SNV), NA will be returned

Usage

get.base.substitution(ref, alt)

Arguments

ref

Vector of reference bases

alt

Vector of alternate bases

Value

base.substitutions