create_introns {valr}

Create intron features.

Description

Numbers in the score column are intron numbers from 5' to 3' independent of strand. I.e., the first introns for + and - strand genes both have score values of 1.

Usage

create_introns(x)

Arguments

x

ivl_df in BED12 format

See Also

Other feature functions: create_tss(), create_utrs3(), create_utrs5()

Examples

x <- read_bed12(valr_example("mm9.refGene.bed.gz"))

create_introns(x)