bed12_to_exons {valr}

Convert BED12 to individual exons in BED6.

Description

After conversion to BED6 format, the score column contains the exon number, with respect to strand (i.e., the first exon for - strand genes will have larger start and end coordinates).

Usage

bed12_to_exons(x)

Arguments

x

ivl_df

See Also

Other utilities: bed_makewindows(), bound_intervals(), flip_strands(), interval_spacing()

Examples

x <- read_bed12(valr_example("mm9.refGene.bed.gz"))

bed12_to_exons(x)