plotTraces {ultrapolaRplot}

Plots ultrasound polar coordinate data

Description

Plots extracted segments with means and standard deviation bands calculated through use of polar coordinates.

Usage

plotTraces(rawTraces, polarTraces, interval = 1, mean.lines =
                 TRUE, points.display = FALSE, palette = c(),
                 bands.lines = FALSE, bands.fill = TRUE,
                 legend.position = "topleft", means.styles = c(),
                 standard.deviation.styles = "l", plot.ticks = FALSE,
                 plot.labels = FALSE, legend.size = 3, transparency =
                 0.37, pdf.filename = c(), bands.linewidth = 0.3,
                 png.filename = c(), legend.linewidth = 5,
                 means.linewidth = 3, tick.size = 2, maskCategories =
                 c())

Arguments

rawTraces

data frame returned from loadTraces()

polarTraces

returned from makeTracesPolar()

bands.fill

boolean, whether or not to show standard deviation bands

bands.lines

boolean, whether or not to show lines on edges of standard deviation bands

bands.linewidth

line thickness of standard deviation bands

interval

sampling interval, in degrees, for finding intersections with existing traces (default = '1')

mean.lines

boolean, whether or not to display mean lines

means.styles

array to override default solid line (sequentially in order of categories)

means.linewidth

size of mean lines

standard.deviation.styles

line type for standard deviation upper and low bands, (default = "l")

transparency

transparency of standard deviation bands (default = 0.37)

palette

array to override default colour palette

pdf.filename

pdf file name, saves in current directory

png.filename

png file name, saves in current directory

plot.labels

boolean, whether or not to show labels

plot.ticks

boolean, whether or not to show tick marks

tick.size

size of label scaling on axises

points.display

boolean, whether or not to show original annotated points

labels

array to override labels

legend.position

default "center", with an option of "topleft", "bottomright"

legend.size

size of legend (default = 0.6)

legend.linewidth

size of displayed legend lines

maskCategories

array to override current segment labels

Value

Returns a plot. User can additionally export plot to a pdf or png.