ukbnmr-package |
Tools for processing the UK Biobank NMR metabolomics biomarker data |
compute_extended_ratios |
Compute extended set of biomarker ratios |
compute_extended_ratio_qc_flags |
Aggregate QC Flags when computing the extended set of biomarker ratios |
compute_nightingale_ratios |
Compute 81 biomarker ratios on the Nightingale platform |
compute_nightingale_ratio_qc_flags |
Aggregate QC Flags when computing Nightingale's 81 biomarker ratios |
extract_biomarkers |
Extract NMR metabolomic biomarkers from a data.frame of UK Biobank fields |
extract_biomarker_qc_flags |
Extract NMR biomarker QC flags from a data.frame of UK Biobank fields |
extract_sample_qc_flags |
Extract NMR sample QC flags from a data.frame of UK Biobank fields |
nmr_info |
Nightingale biomarker information |
recompute_derived_biomarkers |
Recompute composite biomarkers and ratios from the 107 non-derived biomarkers |
recompute_derived_biomarker_qc_flags |
Aggregate QC Flags when recomputing all composite and derived biomarkers |
remove_technical_variation |
Remove technical variation from NMR biomarker data in UK Biobank. |
sample_qc_info |
Nightingale biomarker sample processing information |
test_data |
Data for testing package functions |
ukbnmr |
Tools for processing the UK Biobank NMR metabolomics biomarker data |