| adhoc.twosigma |
adhoc.twosigma: Perform the ad hoc method described in TWO-SIGMA paper |
| lr.twosigma |
Convenient wrapper function for performing joint likelihood ratio tests using the TWO-SIGMA model. |
| lr.twosigma_custom |
Convenient wrapper function for performing joint likelihood ratio tests with the TWO-SIGMA model using custom user-specified formulas. |
| simulate_zero_inflated_nb_random_effect_data |
Simulated zero-inflated negative binomial data with random effects |
| test.vc.twosigma |
Convenient wrapper function for performing (joint) likelihood ratio tests of variance components using the TWO-SIGMA model. |
| twosigma |
Fit the TWO-SIGMA Model. |
| twosigmag |
Gene set testing for single-cell RNA-sequencing data adjusting for inter-gene correlation. |
| twosigma_custom |
Fit the TWO-SIGMA model with custom user-specified model formulas. |
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