Metropolis Sampler and Supporting Functions for Estimating Animal Movement from Archival Tags and Satellite Fixes

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Documentation for package ‘tripEstimation’ version 0.0-46

• DESCRIPTION file.
• Package NEWS.

Help Pages

as.image.pimg	Convert to image list
as.local.pimg	Convert to image list
as.matrix.pimg	Convert to image list
astro	Calculations for position of the sun and moon
behav.bin	Bin MCMC chains.
bin.pimg	Bin MCMC chains.
bits	Set and get bits from binary masks.
bits<-	Set and get bits from binary masks.
bmvnorm.proposal	Manage proposal functions tune variance for metropolis sampler
chain.dim	Manage MCMC cache.
chain.read	Manage MCMC cache.
chain.write	Manage MCMC cache.
chunk.bin	Bin MCMC chains.
combine	Convert to image list
coords.pimg	Convert to image list
elevation	Calculate elevation of astronomical objects
EQUHOR	Calculations for position of the sun and moon
FRAC	Calculations for position of the sun and moon
get.mask	Create, access and manipulate spatial masks
initialize.x	Diagnose and initialize light level estimation.
julcent	Julian day and Julian century calculations from date-time values
julday	Julian day and Julian century calculations from date-time values
k.prior	Older versions of solar location estimation
light.quantile	Diagnose and initialize light level estimation.
LMST	Calculations for position of the sun and moon
lunar	Calculations for position of the sun and moon
metropolis	Metropolis-Hastings sampler for location estimation for archival and satellite tag
metropolis0	Metropolis-Hastings sampler for location estimation for archival and satellite tag
mini.sun	Calculations for position of the sun and moon
MJD	Calculations for position of the sun and moon
mkCalibration	Create calibration of solar elevation to measured light level.
mkElevationSeg	Older versions of solar location estimation
mkLookup	Create a lookup function to query locations against spatial masks
mkMaskObject	Create, access and manipulate spatial masks
mkNLPosterior	Older versions of solar location estimation
mkSmall	Create, access and manipulate spatial masks
mvnorm.proposal	Manage proposal functions tune variance for metropolis sampler
norm.proposal	Manage proposal functions tune variance for metropolis sampler
old.dist.gc	Older versions of solar location estimation
old.find.init	Older versions of solar location estimation
old.metropolis	Older versions of solar location estimation
old.mkLookup	Older versions of solar location estimation
pick	Choose twilight segments interactively from light data.
picksegs	Choose twilight segments interactively from light data.
pimg	Create a collection of probability images, for MCMC binning.
pimg.list	Create a collection of probability images, for MCMC binning.
POLAR	Calculations for position of the sun and moon
position.logp	Diagnose and initialize light level estimation.
satellite.model	Function to create a satellite model object for metropolis location sampler
set.mask<-	Create, access and manipulate spatial masks
show.segment	Diagnose and initialize light level estimation.
solar	Calculate solar postion parameters
solar.model	Function to create a solar model object for metropolis location sampler
unzipper	Convert to image list