The First Software for Quantitative Trajectory Inference


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Documentation for package ‘treefit’ version 1.0.2

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generate_2d_n_arms_linked_star_data Generate a 2-dimensional linked star tree data
generate_2d_n_arms_star_data Generate a 2-dimensional star tree data
generate_n_arms_star_data Generate a multi-dimensional star tree data
perturbate_knn Generate perturbated expression by k-NN data
perturbate_poisson Generate perturbated counts by the Poisson distribution
plot.treefit Plot estimated results
treefit Estimate the goodness-of-fit between tree models and data