Create ToxPi Prioritization Models

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Documentation for package ‘toxpiR’ version 1.2.1

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

as.data.frame-method	ToxPi Result
as.TxpModelList	List of TxpModel objects
as.TxpResultList	List of TxpResult objects
as.TxpSliceList	List of TxpSlice objects
as.TxpTransFuncList	List of TxpTransFunc objects
boxLegendGrob	Create a filled-box legend
duplicated-method	List of TxpModel objects
duplicated-method	List of TxpResult objects
duplicated-method	List of TxpSlice objects
grid.pieGridGrob	Make grid of pieGrobs
grid.pieGrob	Create a pie grob
length-method	ToxPi Model
length-method	ToxPi Result
length-method	ToxPi Slice
merge-method	ToxPi Model
merge-method	ToxPi Slice
names-method	ToxPi Model
names-method	ToxPi Result
names<--method	ToxPi Model
names<--method	ToxPi Result
pieGridGrob	Make grid of pieGrobs
pieGrob	Create a pie grob
plot	Plot TxpResult objects
plot-method	Plot TxpResult objects
sort-method	ToxPi Result
toxpiR-datasets	toxpiR data objects
txpCalculateScores	Calculate ToxPi Scores for the given model and input data
txpCalculateScores-method	Calculate ToxPi Scores for the given model and input data
txpExportGui	Export comma-separated file intended for ToxPi GUI
txpGenerics	toxpiR package generics
txpIDs	toxpiR package generics
txpIDs-method	ToxPi Result
txpIDs<-	toxpiR package generics
txpIDs<--method	ToxPi Result
txpImportGui	Import data file generated by ToxPi GUI
TxpModel	ToxPi Model
txpModel	toxpiR package generics
TxpModel-class	ToxPi Model
txpModel-method	ToxPi Result
TxpModel-txpSlices	ToxPi Model
TxpModelList	List of TxpModel objects
TxpModelList-class	List of TxpModel objects
txpRanks	toxpiR package generics
txpRanks-method	ToxPi Result
TxpResult	ToxPi Result
TxpResult-class	ToxPi Result
TxpResult-plot	Plot TxpResult objects
TxpResultList	List of TxpResult objects
TxpResultList-class	List of TxpResult objects
TxpResultParam	ToxPi Result Parameters
txpResultParam	toxpiR package generics
TxpResultParam-class	ToxPi Result Parameters
txpResultParam-method	ToxPi Result
txpScores	toxpiR package generics
txpScores-method	ToxPi Result
TxpSlice	ToxPi Slice
TxpSlice-class	ToxPi Slice
TxpSliceList	List of TxpSlice objects
TxpSliceList-class	List of TxpSlice objects
txpSlices	toxpiR package generics
txpSlices-method	ToxPi Model
txpSlices-method	ToxPi Result
txpSlices<-	toxpiR package generics
txpSlices<--method	ToxPi Model
txpSliceScores	toxpiR package generics
txpSliceScores-method	ToxPi Result
TxpTransFunc	Numeric transformation function
TxpTransFunc-class	Numeric transformation function
TxpTransFuncList	List of TxpTransFunc objects
TxpTransFuncList-class	List of TxpTransFunc objects
txpTransFuncs	toxpiR package generics
txpTransFuncs-method	ToxPi Model
txpTransFuncs-method	ToxPi Result
txpTransFuncs-method	ToxPi Slice
txpTransFuncs-method	List of TxpSlice objects
txpTransFuncs<-	toxpiR package generics
txpTransFuncs<--method	ToxPi Model
txpTransFuncs<--method	ToxPi Slice
txpValueNames	toxpiR package generics
txpValueNames-method	ToxPi Model
txpValueNames-method	ToxPi Result
txpValueNames-method	ToxPi Slice
txpValueNames-method	List of TxpSlice objects
txpValueNames<-	toxpiR package generics
txpValueNames<--method	ToxPi Slice
txpWeights	toxpiR package generics
txpWeights-method	ToxPi Model
txpWeights-method	ToxPi Result
txpWeights<-	toxpiR package generics
txpWeights<--method	ToxPi Model
txp_example_input	toxpiR data objects
txp_example_model	toxpiR data objects
[-method	ToxPi Result