genome_subtract {tidygenomics} | R Documentation |
Subtract one data frame from another based on chromosome, start and end.
Description
Subtract one data frame from another based on chromosome, start and end.
Usage
genome_subtract(x, y, by = NULL)
Arguments
x |
A dataframe. |
y |
A dataframe. |
by |
A character vector with 3 entries which are used to match the chromosome, start and end column.
For example: |
Value
The subtracted dataframe of x
and y
with the new boundaries.
Examples
library(dplyr)
x1 <- data.frame(id = 1:4, bla=letters[1:4],
chromosome = c("chr1", "chr1", "chr2", "chr1"),
start = c(100, 200, 300, 400),
end = c(150, 250, 350, 450))
x2 <- data.frame(id = 1:4, BLA=LETTERS[1:4],
chromosome = c("chr1", "chr2", "chr1", "chr1"),
start = c(120, 210, 300, 400),
end = c(125, 240, 320, 415))
j <- genome_subtract(x1, x2, by=c("chromosome", "start", "end"))
print(j)
[Package tidygenomics version 0.1.2 Index]