plot_purity {tidyestimate}

Plot Affymetrix purity scores against ESTIMATE study purity scores

Description

Plot Affymetrix purity scores against ESTIMATE study purity scores

Usage

plot_purity(scores, is_affymetrix)

Arguments

scores

a data.frame, usually one output from estimate_score

is_affymetrix

logical. Are these data from an Affymetrix experiment? Must be TRUE - this is essentially a verification from the user

Value

a ggplot

Examples

filter_common_genes(ov, id = "hgnc_symbol", tidy = FALSE, tell_missing = TRUE, find_alias = TRUE) |> 
  estimate_score(is_affymetrix = TRUE) |>
  plot_purity(is_affymetrix = TRUE)